2014-10-27 96 views
13

我有一个输入文件,其中每个值都以字符串形式存储。 它位于csv文件中,每个条目在双引号内。csv中的双引号元素不能读熊猫

示例文件:

"column1","column2", "column3", "column4", "column5", "column6" 
"AM", "07", "1", "SD", "SD", "CR" 
"AM", "08", "1,2,3", "PR,SD,SD", "PR,SD,SD", "PR,SD,SD" 
"AM", "01", "2", "SD", "SD", "SD" 

只有六列。我需要输入什么选项来读熊猫read_csv才能正确读取?

我目前正在尝试:

import pandas as pd 
df = pd.read_csv(file, quotechar='"') 

但是这给我的错误信息: CParserError: Error tokenizing data. C error: Expected 6 fields in line 3, saw 14

这显然意味着它忽视了“'和分析每一个逗号作为字段 (“1,2,3”,“PR,SD,SD”,“PR,SD,SD”,“PR,SD,SD”)对于第3行,第3列至第6列应为带逗号的字符串。 )

如何获得pandas.read_csv来正确解析?

谢谢。

+0

如果你善于用正则表达式,你可以在九月arguement用它来read_csv ... http://stackoverflow.com/questions/24091356/pandas-read-csv-with-final-column-containing -commas – rhaskett 2014-10-27 23:38:08

回答

7

这将工作。它回退到python解析器(因为你有非常规的分隔符,例如它们是逗号,有时候是空格)。如果你只有逗号,它会使用C语法分析器,速度会更快。

In [1]: import csv 

In [2]: !cat test.csv 
"column1","column2", "column3", "column4", "column5", "column6" 
"AM", "07", "1", "SD", "SD", "CR" 
"AM", "08", "1,2,3", "PR,SD,SD", "PR,SD,SD", "PR,SD,SD" 
"AM", "01", "2", "SD", "SD", "SD" 

In [3]: pd.read_csv('test.csv',sep=',\s+',quoting=csv.QUOTE_ALL) 
pandas/io/parsers.py:637: ParserWarning: Falling back to the 'python' engine because the 'c' engine does not support regex separators; you can avoid this warning by specifying engine='python'. 
    ParserWarning) 
Out[3]: 
    "column1","column2" "column3" "column4" "column5" "column6" 
"AM"    "07"  "1"  "SD"  "SD"  "CR" 
"AM"    "08" "1,2,3" "PR,SD,SD" "PR,SD,SD" "PR,SD,SD" 
"AM"    "01"  "2"  "SD"  "SD"  "SD"