运行devtools :: document()的输出。我不知道如何解决这个问题,并且roxygen文档在帮助排除错误信息方面并不是很出色。任何想法如何摆脱这个,所以我的功能可以记录?Roxygen错误“跳过无效路径”
Updating NEONExclusionZones documentation
Loading NEONExclusionZones
First time using roxygen2 4.0. Upgrading automatically...
Writing NAMESPACE
Skipping invalid path: 1CalcMosqImpact-TITLE.Rd
Skipping invalid path: 1IstotopicChange-TITLE.Rd
Skipping invalid path: 1findInters-TITLE.Rd
Skipping invalid path: 1rad_foot-TITLE.Rd
这是我试图记录的函数的一个示例。我意识到它没有完整的文档,但我正在试图获得一个基本的包,我可以继续更新。
##'NAME
#'@name 1findInters
#'
##'TITLE
#'@title Find intersection between footprint curve and a threshold curve
#'
##'TYPE
#'Standalone R Function
#'
##'DESCRIPTION
#'@description Calculates where the flux footprint curve and the threshold curve intersect.
#'
##'USAGE
#'\dontrun{
#' find_inters(fun_weight=impact_KM01[x,], location=x_step_airs[-1], threshold=SA_dist)
#' }
#'
##'ARGUMENTS
#' @param fun_weight List of footprint curve distances
#' @param location List of distance from tower [m]
#' @param threshold Threshold for influence of all activities on tower measurement source areas [%]
#'
##'DETAILS
#'
#'
##'VALUE
#'
#'
##'NOTE
#'
##'SEE ALSO
#'
#'
#'
#'
##'EXAMPLES
#
#'
find_inters <- function(
fun_weight,
location,
threshold
) {
#difference between footprint curve and threshold line
DIFF <- fun_weight - threshold
#interpolate to ensure finding local result
location1 <- approx(location, n=1e3)$y
DIFF1 <- approx(x=location, y=DIFF, xout=location1)$y
#find intersect farthest away from tower
#in order to find 1 real zero crossing, at least two zero crossings have to be present.
#Hence I added c(-1,1) here
WHR <- extrema(c(-Inf,Inf,DIFF1))
if(WHR$ncross <= 1) {
out <- NA
} else {
#As I added c(-1,1) above, two indices have to be subtracted again here.
out <- round(location1[WHR$cross[WHR$ncross,2]-2])
}
#return result
return(out)
}
你应该遵循roxygen描述,小插曲,其他包等格式和例子https://github.com/yihui/roxygen2/ – rawr