我想连接到从R sparklyr S3存储桶。 我可以将本地文件读取到spark上下文中。 然而,尝试连接s3似乎是问题, 抛出了一大堆错误。 以下是使用的代码列表。Sparklyr连接到S3存储桶抛出错误
注意:单个s3存储桶有多个csv文件,其中 遵循相同的模式。
library(sparklyr)
library(tidyverse)
sparklyr :: spark_install (version = "2.0.2" , hadoop_version = "2.7")
sparklyr::spark_install(version = "2.0.2" , hadoop_version = "2.7")
Sys.setenv (AWS_ACCESS_KEY_ID = "xxxx")
Sys.setenv (AWS_SECRET_ACCESS_KEY = "xxxx")
Sys.setenv (AWS_DEFAULT_REGION = "ap-southeast-1")
Spark_config <- sparklyr :: spark_config()
sc <- sparklyr :: spark_connect (master = "local" ,config = Spark_config)
files = "s3n://temp-sg/MVC"
temp<-spark_read_csv(sc,name = "MVC",path=files,infer_schema = TRUE)
spark_disconnect(sc)
这里的任何帮助,非常感谢。
以下是错误转储使用S3A的://
Error: java.lang.IllegalArgumentException: java.net.URISyntaxException: Expected scheme-specific part at index 4: s3a:
at org.apache.hadoop.fs.Path.initialize(Path.java:206)
at org.apache.hadoop.fs.Path.<init>(Path.java:172)
at org.apache.hadoop.fs.Path.<init>(Path.java:94)
at org.apache.hadoop.fs.Globber.glob(Globber.java:211)
at org.apache.hadoop.fs.FileSystem.globStatus(FileSystem.java:1644)
at org.apache.hadoop.mapred.FileInputFormat.singleThreadedListStatus(FileInputFormat.java:257)
at org.apache.hadoop.mapred.FileInputFormat.listStatus(FileInputFormat.java:228)
at org.apache.hadoop.mapred.FileInputFormat.getSplits(FileInputFormat.java:313)
at org.apache.spark.rdd.HadoopRDD.getPartitions(HadoopRDD.scala:199)
at org.apache.spark.rdd.RDD$$anonfun$partitions$2.apply(RDD.scala:239)
at org.apache.spark.rdd.RDD$$anonfun$partitions$2.apply(RDD.scala:237)
at scala.Option.getOrElse(Option.scala:120)
at org.apache.spark.rdd.RDD.partitions(RDD.scala:237)
at org.apache.spark.rdd.MapPartitionsRDD.getPartitions(MapPartitionsRDD.scala:35)
at org.apache.spark.rdd.RDD$$anonfun$partitions$2.apply(RDD.scala:239)
at org.apache.spark.rdd.RDD$$anonfun$partitions$2.apply(RDD.scala:237)
at scala.Option.getOrElse(Option.scala:120)
at org.apache.spark.rdd.RDD.partitions(RDD.scala:237)
at org.apache.spark.rdd.RDD$$anonfun$take$1.apply(RDD.scala:1307)
at org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:150)
at org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:111)
at org.apache.spark.rdd.RDD.withScope(RDD.scala:316)
at org.apache.spark.rdd.RDD.take(RDD.scala:1302)
at com.databricks.spark.csv.CsvRelation.firstLine$lzycompute(CsvRelation.scala:249)
at com.databricks.spark.csv.CsvRelation.firstLine(CsvRelation.scala:245)
at com.databricks.spark.csv.CsvRelation.inferSchema(CsvRelation.scala:223)
at com.databricks.spark.csv.CsvRelation.<init>(CsvRelation.scala:72)
at com.databricks.spark.csv.DefaultSource.createRelation(DefaultSource.scala:157)
at com.databricks.spark.csv.DefaultSource.createRelation(DefaultSource.scala:44)
at org.apache.spark.sql.execution.datasources.ResolvedDataSource$.apply(ResolvedDataSource.scala:158)
at org.apache.spark.sql.DataFrameReader.load(DataFrameReader.scala:119)
at org.apache.spark.sql.DataFrameReader.load(DataFrameReader.scala:109)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(Unknown Source)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)
at java.lang.reflect.Method.invoke(Unknown Source)
at sparklyr.Invoke$.invoke(invoke.scala:94)
at sparklyr.StreamHandler$.handleMethodCall(stream.scala:89)
at sparklyr.StreamHandler$.read(stream.scala:55)
at sparklyr.BackendHandler.channelRead0(handler.scala:49)
at sparklyr.BackendHandler.channelRead0(handler.scala:14)
at io.netty.channel.SimpleChannelInboundHandler.channelRead(SimpleChannelInboundHandler.java:105)
at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:308)
at io.netty.channel.AbstractChannelHandlerContext.fireChannelRead(AbstractChannelHandlerContext.java:294)
at io.netty.handler.codec.MessageToMessageDecoder.channelRead(MessageToMessageDecoder.java:103)
at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:308)
at io.netty.channel.AbstractChannelHandlerContext.fireChannelRead(AbstractChannelHandlerContext.java:294)
at io.netty.handler.codec.ByteToMessageDecoder.channelRead(ByteToMessageDecoder.java:244)
at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:308)
at io.netty.channel.AbstractChannelHandlerContext.fireChannelRead(AbstractChannelHandlerContext.java:294)
at io.netty.channel.DefaultChannelPipeline.fireChannelRead(DefaultChannelPipeline.java:846)
at io.netty.channel.nio.AbstractNioByteChannel$NioByteUnsafe.read(AbstractNioByteChannel.java:131)
at io.netty.channel.nio.NioEventLoop.processSelectedKey(NioEventLoop.java:511)
at io.netty.channel.nio.NioEventLoop.processSelectedKeysOptimized(NioEventLoop.java:468)
at io.netty.channel.nio.NioEventLoop.processSelectedKeys(NioEventLoop.java:382)
at io.netty.channel.nio.NioEventLoop.run(NioEventLoop.java:354)
at io.netty.util.concurrent.SingleThreadEventExecutor$2.run(SingleThreadEventExecutor.java:111)
at io.netty.util.concurrent.DefaultThreadFactory$DefaultRunnableDecorator.run(DefaultThreadFactory.java:137)
at java.lang.Thread.run(Unknown Source)
Caused by: java.net.URISyntaxException: Expected scheme-specific part at index 4: s3a:
at java.net.URI$Parser.fail(Unknown Source)
at java.net.URI$Parser.failExpecting(Unknown Source)
at java.net.URI$Parser.parse(Unknown Source)
at java.net.URI.<init>(Unknown Source)
at org.apache.hadoop.fs.Path.initialize(Path.java:203)
... 58 more
错误与使用S3N的转储://
Error: java.lang.IllegalArgumentException: java.net.URISyntaxException: Expected scheme-specific part at index 4: s3n:
at org.apache.hadoop.fs.Path.initialize(Path.java:206)
at org.apache.hadoop.fs.Path.<init>(Path.java:172)
at org.apache.hadoop.fs.Path.<init>(Path.java:94)
at org.apache.hadoop.fs.Globber.glob(Globber.java:211)
at org.apache.hadoop.fs.FileSystem.globStatus(FileSystem.java:1644)
at org.apache.hadoop.mapred.FileInputFormat.singleThreadedListStatus(FileInputFormat.java:257)
at org.apache.hadoop.mapred.FileInputFormat.listStatus(FileInputFormat.java:228)
at org.apache.hadoop.mapred.FileInputFormat.getSplits(FileInputFormat.java:313)
at org.apache.spark.rdd.HadoopRDD.getPartitions(HadoopRDD.scala:199)
at org.apache.spark.rdd.RDD$$anonfun$partitions$2.apply(RDD.scala:239)
at org.apache.spark.rdd.RDD$$anonfun$partitions$2.apply(RDD.scala:237)
at scala.Option.getOrElse(Option.scala:120)
at org.apache.spark.rdd.RDD.partitions(RDD.scala:237)
at org.apache.spark.rdd.MapPartitionsRDD.getPartitions(MapPartitionsRDD.scala:35)
at org.apache.spark.rdd.RDD$$anonfun$partitions$2.apply(RDD.scala:239)
at org.apache.spark.rdd.RDD$$anonfun$partitions$2.apply(RDD.scala:237)
at scala.Option.getOrElse(Option.scala:120)
at org.apache.spark.rdd.RDD.partitions(RDD.scala:237)
at org.apache.spark.rdd.RDD$$anonfun$take$1.apply(RDD.scala:1307)
at org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:150)
at org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:111)
at org.apache.spark.rdd.RDD.withScope(RDD.scala:316)
at org.apache.spark.rdd.RDD.take(RDD.scala:1302)
at com.databricks.spark.csv.CsvRelation.firstLine$lzycompute(CsvRelation.scala:249)
at com.databricks.spark.csv.CsvRelation.firstLine(CsvRelation.scala:245)
at com.databricks.spark.csv.CsvRelation.inferSchema(CsvRelation.scala:223)
at com.databricks.spark.csv.CsvRelation.<init>(CsvRelation.scala:72)
at com.databricks.spark.csv.DefaultSource.createRelation(DefaultSource.scala:157)
at com.databricks.spark.csv.DefaultSource.createRelation(DefaultSource.scala:44)
at org.apache.spark.sql.execution.datasources.ResolvedDataSource$.apply(ResolvedDataSource.scala:158)
at org.apache.spark.sql.DataFrameReader.load(DataFrameReader.scala:119)
at org.apache.spark.sql.DataFrameReader.load(DataFrameReader.scala:109)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(Unknown Source)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)
at java.lang.reflect.Method.invoke(Unknown Source)
at sparklyr.Invoke$.invoke(invoke.scala:94)
at sparklyr.StreamHandler$.handleMethodCall(stream.scala:89)
at sparklyr.StreamHandler$.read(stream.scala:55)
at sparklyr.BackendHandler.channelRead0(handler.scala:49)
at sparklyr.BackendHandler.channelRead0(handler.scala:14)
at io.netty.channel.SimpleChannelInboundHandler.channelRead(SimpleChannelInboundHandler.java:105)
at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:308)
at io.netty.channel.AbstractChannelHandlerContext.fireChannelRead(AbstractChannelHandlerContext.java:294)
at io.netty.handler.codec.MessageToMessageDecoder.channelRead(MessageToMessageDecoder.java:103)
at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:308)
at io.netty.channel.AbstractChannelHandlerContext.fireChannelRead(AbstractChannelHandlerContext.java:294)
at io.netty.handler.codec.ByteToMessageDecoder.channelRead(ByteToMessageDecoder.java:244)
at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:308)
at io.netty.channel.AbstractChannelHandlerContext.fireChannelRead(AbstractChannelHandlerContext.java:294)
at io.netty.channel.DefaultChannelPipeline.fireChannelRead(DefaultChannelPipeline.java:846)
at io.netty.channel.nio.AbstractNioByteChannel$NioByteUnsafe.read(AbstractNioByteChannel.java:131)
at io.netty.channel.nio.NioEventLoop.processSelectedKey(NioEventLoop.java:511)
at io.netty.channel.nio.NioEventLoop.processSelectedKeysOptimized(NioEventLoop.java:468)
at io.netty.channel.nio.NioEventLoop.processSelectedKeys(NioEventLoop.java:382)
at io.netty.channel.nio.NioEventLoop.run(NioEventLoop.java:354)
at io.netty.util.concurrent.SingleThreadEventExecutor$2.run(SingleThreadEventExecutor.java:111)
at io.netty.util.concurrent.DefaultThreadFactory$DefaultRunnableDecorator.run(DefaultThreadFactory.java:137)
at java.lang.Thread.run(Unknown Source)
Caused by: java.net.URISyntaxException: Expected scheme-specific part at index 4: s3n:
at java.net.URI$Parser.fail(Unknown Source)
at java.net.URI$Parser.failExpecting(Unknown Source)
at java.net.URI$Parser.parse(Unknown Source)
at java.net.URI.<init>(Unknown Source)
at org.apache.hadoop.fs.Path.initialize(Path.java:203)
... 58 more
你可以发布您的错误信息吗?至少在事情出错后的前几行中。 – JanLauGe
更新错误日志分别为s3a和s3n: –