2017-10-18 96 views
2

当我绘制与制图网络图,像下面的例子玩具...如何使用图解器最小化边缘交叉点的数量,R?

library(DiagrammeR) 
Dia <- function(edg, nodesd) { 
     nodes <- create_node_df( n=length(nodesd), label=nodesd, 
     width=0.3) 
     edges <- create_edge_df(from = edg$EveFrom, to = edg$EveTo, 
       rel = "leading_to") 
graph <- create_graph( nodes_df = nodes, edges_df = edges) 
render_graph(graph) 
} 


niv <- c("A","B","C","D","E","X","Y") 

temp <- data.table(EveFrom=factor(c("A","A","A","A","B","C","D","E", 
    "X", "B"), levels=niv), 
EveTo=factor(c("B","C","D","E","X","X","Y","Y","Y", "C"), levels=niv)) 

Dia(temp,niv) 

enter image description here

我怎么能告诉制图到自动最小化边交叉的次数?

在这个简单的例子,如果C和B的位置被交换的结果不会有任何边缘交叉。 在更复杂的示例中,我们无法删除所有交叉点,但至少将其最小化。

随着visnetwork我可以重新定位节点

enter image description here

但它有其他缺点,例如,它不会让你将其导出为矢量图形。

PD:这是bergant解决方案的输出(带有隐藏标签): enter image description here enter image description here

回答

1

我认为dot布局将更好地生产。添加全局属性是这样的:

graph <- create_graph( nodes_df = nodes, edges_df = edges) 
graph <- set_global_graph_attrs(graph, "layout", "dot", "graph") 
graph <- add_global_graph_attrs(graph, "rankdir", "LR", "graph") 

g

+0

是否也可以模仿我的visnetwork结果呢? (例如,在每个边上添加标签或更改边缘宽度) – skan

+1

10标签:是,在'create_edge_df'(字符串向量)中添加'label'参数。 – bergant

+0

宽度:使用'penwidth' = 3例如 – bergant

1

使用dot布局选项(从here灵感制造)

# install.packages(c("DiagrammeR"), dependencies = TRUE) 
library(DiagrammeR) 

grViz(" 
digraph dot { 

graph [layout = dot] # dot, neato, twopi, and circo 

A -> {B C D E} 
B -> {C X} 
C -> {X} 
D -> {Y} 
E -> {Y} 
X -> {Y} 
}") 

dot layoutttt

+0

如果我想要一个圆形布局,命令行是什么?或者我怎样才能将它的位置固定在一些坐标上?我见过的唯一选项(create_node_df,x =和y =)似乎只在使用render_graph(graph,output =“visNetwork”)时才起作用,但该输出不能保存为矢量图。 – skan

+0

我建议你问一个新问题。把它做成一件事,然后用这个问题和答案作为参考。 –