2017-03-07 97 views
0

在ggplot2中使用geom_tile我有一个相对简单的热图。它只是一个连续数据的小矩阵,作为彩色框(df1),我想叠加第二个逻辑geom_tile,概述TRUE值(df2)。能做这样的事情吗?我知道在一起添加两个热图似乎会很丑,但这些都是小而简单的事情。在ggplot中添加第二个geom_tile图层

library(ggplot2) 
n <- 4 
df1 <- data.frame(x = rep(letters[1:n], times = n), 
        y = rep(1:n, each = n), 
        z = rnorm(n^2)) 

df2 <- data.frame(x = rep(letters[1:n], times = n), 
        y = rep(1:n, each = n), 
        z = FALSE) 
df2$z[c(2,14)] <- TRUE 

p1 <- ggplot(df1, aes(x = x, y = y)) 
p1 <- p1 + geom_tile(aes(fill = z), colour = "grey20") 
p1 <- p1 + scale_fill_gradient2(low = "darkgreen", 
           mid = "white", 
           high = "darkred", 
           breaks = c(min(df1$z), max(df1$z)), 
           labels = c("Low", "High")) 
p1 
# overlay df2 to outline the TRUE boxes or dim the FALSE boxes with alpha? 
# p1 <- p1 + geom_tile(data = df2, aes(fill = z), colour = "grey20") 
+1

如何使用不同的线大小来突出TRUE;?使用:'+ geom_tile(data = df2,aes(size = factor(z,c(TRUE,FALSE))),alpha = 0,color =“blue”)+ scale_size_discrete(“Your legend”,range = c 3,0.5))。 – JasonWang

+0

非常酷!谢谢。 – user4100013

回答

1

就合并这两个数据集为一个,这样你可以映射到最初的Z值来填充,而另阿尔法:

ggplot(merge(df1, df2, by = c('x', 'y')), aes(x = x, y = y)) + 
    geom_tile(aes(fill = z.x, alpha = z.y), colour = "grey20") + 
    scale_fill_gradient2(low = "darkgreen", 
         mid = "white", 
         high = "darkred", 
         breaks = c(min(df1$z), max(df1$z)), 
         labels = c("Low", "High")) 

plot with fill and alpha

你可以使用笔触颜色代替笔画部分覆盖geom_tile

ggplot(merge(df1, df2, by = c('x', 'y')), aes(x = x, y = y)) + 
    geom_tile(aes(fill = z.x, colour = z.y), size = 2) + 
    scale_fill_gradient2(low = "darkgreen", 
         mid = "white", 
         high = "darkred", 
         breaks = c(min(df1$z), max(df1$z)), 
         labels = c("Low", "High")) + 
    scale_color_manual(values = c('#00000000', 'blue')) 

outlined tiles

所以要让它合理分配,你必须通过与一层的填充,然后一层用清晰的轮廓填充破解它:

ggplot(merge(df1, df2, by = c('x', 'y')), aes(x = x, y = y)) + 
    geom_raster(aes(fill = z.x)) + 
    geom_tile(aes(colour = z.y), fill = '#00000000', size = 2) + 
    scale_fill_gradient2(low = "darkgreen", 
         mid = "white", 
         high = "darkred", 
         breaks = c(min(df1$z), max(df1$z)), 
         labels = c("Low", "High")) + 
    scale_color_manual(values = c('#00000000', 'blue')) 

properly outlined raster

+0

我认为这个alpha例子最适合我的需求。非常感谢! – user4100013

1

我对@JasonWang有类似的方法,但我同时设置边框的颜色和大小。

p1 + geom_tile(data=df2, aes(colour=factor(z, c(TRUE, FALSE)), size=factor(z, c(TRUE, FALSE))), alpha=0) + 
    scale_colour_manual("z", values=c("blue4", "white")) + 
    scale_size_manual("z", values=c(3, 0)) 

enter image description here

+0

非常酷!谢谢。 – user4100013