2016-11-01 59 views
4

我试图模拟校准研究仪器的复合动作电位。目标是以250 Hz输出某个10μV信号。低电压将在稍后处理,对我来说主要问题是频率。下面的图片显示了我正在尝试制作的系统的概况。树莓派上的Python延迟

enter image description here

通过从活的动物的数据采集,以及处理在MATLAB中的数据,我已经由低噪声信号,并在12位格式789倍的值。然后我使用Git克隆了以csv格式将其存储到Raspberry Pi的存储库。以下是我在RPi上编写的Python脚本。您可以跳到脚本中的def main来查看功能。

#!/usr/bin/python 

import spidev 
from time import sleep 
import RPi.GPIO as GPIO 
import csv 
import sys 
import math 

DEBUG = False 
spi_max_speed = 20 * 1000000 
V_Ref = 5000 
Resolution = 2**12 
CE = 0 

spi = spidev.SpiDev() 
spi.open(0,CE) 
spi.max_speed_hz = spi_max_speed 

LDAQ = 22 
GPIO.setmode(GPIO.BOARD) 
GPIO.setup(LDAQ, GPIO.OUT) 
GPIO.output(LDAQ,GPIO.LOW) 

def setOutput(val): 
    lowByte = val & 0b11111111 #Make bytes using MCP4921 data sheet info 
    highByte = ((val >> 8) & 0xff) | 0b0 << 7 | 0b0 << 6 | 0b1 << 5 | 0b1 << 4 
    if DEBUG : 
     print("Highbyte = {0:8b}".format(highByte)) 
     print("Lowbyte = {0:8b}".format(lowByte)) 
    spi.xfer2([highByte, lowByte]) 

def main(): 
    with open('signal12bit.csv') as signal: 
     signal_length = float(raw_input("Please input signal length in ms: ")) 
     delay = float(raw_input("Please input delay after signal in ms: ")) 
     amplitude = float(raw_input("Please input signal amplitude in mV: ")) 
     print "Starting Simulant with signal length %.1f ms, delay %.1f ms and amplitude %.1f mV." % (signal_length, delay, amplitude) 
     if not DEBUG : print "Press ctrl+c to close." 
     sleep (1) #Wait a sec before starting 
     read = csv.reader(signal, delimiter=' ', quotechar='|') 
     try: 
      while(True): 
       signal.seek(0) 
       for row in read: #Loop csv file rows 
        if DEBUG : print ', '.join(row) 
        setOutput(int(row)/int((V_Ref/amplitude))) #Adjust amplitude, not super necessary to do in software 
        sleep (signal_length/(data_points*1000) #Divide by 1000 to make into ms, divide by length of data 
       sleep (delay/1000) 
     except (KeyboardInterrupt, Exception) as e: 
      print(e) 
      print "Closing SPI channel" 
      setOutput(0) 
      GPIO.cleanup() 
      spi.close() 

if __name__ == '__main__': 
    main() 

该脚本几乎按预期工作。将MCP4921 DAC的输出引脚连接到示波器可以很好地再现信号,并正确输出后续延迟。

不幸的是,数据点比我需要的要多得多。我能够将信号塞入的最短时间约为79毫秒。这是因为在休眠功能中除以789000,我知道这对Python和Pi来说太多了,因为读取csv文件需要时间。但是,如果我尝试手动创建数组,并将这些值取出而不是读取csv文件,我可以实现6 kHz以上的频率而不会丢失。

我的问题是

我怎样才能得到这个信号出现在250 Hz的频率,并从用户的输入可靠地降低呢?我想过在脚本中手动将789值写入数组,然后将SPI速度更改为适合250 Hz的值。这可以消除慢速csv阅读器功能,但是不能减少用户输入的频率。无论如何,消除对csv.read的需求将会有很大的帮助。谢谢!

+0

您可以从您的csv阅读器中创建一个列表,以便将其缓存在内存中。 –

+0

我试过这样做,但它似乎没有任何区别。在这个脚本之前,我从来没有用Python进行过编程,你能否具体解释一下如何只读取一次csv,然后循环缓存的列表呢? – Tachyon

+0

'250Hz'=您是否意味着每个789个样本之间有4ms? – barny

回答

0

今天早些时候发现,所以我想我会在这里发表一个答案,以防将来有人遇到类似的问题。

由于多种原因,数据点之间的内部延迟问题无法用sleep()解决。我落得这样做以下

  • 移动所有数学和函数调用超过了临界循环
  • 请在花费无延迟传输值时间的线性回归分析
  • 将CSV文件中的数据点数量增加到MATLAB中的“很多”(9600)
  • 计算满足用户所需信号长度所需的点数
  • 从现在较大的CSV文件中取平均分离的条目以适应尽可能接近点数。
  • 在临界循环

新的代码计算这些值,然后计算出SPI明确字节

  • 保存两个字节清单,并将其输出直接,具有位输入的检查,是低于

    #!/usr/bin/python 
    
    import spidev 
    from time import sleep 
    import RPi.GPIO as GPIO 
    import sys 
    import csv 
    import ast 
    
    spi_max_speed = 16 * 1000000 # 16 MHz 
    V_Ref = 5000 # 5V in mV 
    Resolution = 2**12 # 12 bits for the MCP 4921 
    CE = 0 # CE0 or CE1, select SPI device on bus 
    total_data_points = 9600 #CSV file length 
    
    spi = spidev.SpiDev() 
    spi.open(0,CE) 
    spi.max_speed_hz = spi_max_speed 
    
    LDAQ=22 
    GPIO.setmode(GPIO.BOARD) 
    GPIO.setup(LDAQ, GPIO.OUT) 
    GPIO.output(LDAQ,GPIO.LOW) 
    
    def main(): 
    
        #User inputs and checking for digits 
        signalLengthU = raw_input("Input signal length in ms, minimum 4: ") 
        if signalLengthU.isdigit(): 
         signalLength = signalLengthU 
        else: 
         signalLength = 4 
    
        delayU = raw_input("Input delay after signal in ms: ") 
        if delayU.isdigit(): 
         delay = delayU 
        else: 
         delay = 0 
    
        amplitudeU = raw_input("Input signal amplitude in mV, between 1 and 5000: ") 
        if amplitudeU.isdigit(): 
         amplitude = amplitudeU 
        else: 
         amplitude = 5000 
    
        #Calculate data points, delay, and amplitude 
        data_points = int((1000*float(signalLength)-24.6418)/12.3291) 
        signalDelay = float(delay)/1000 
        setAmplitude = V_Ref/float(amplitude) 
    
        #Load and save CSV file 
        datain = open('signal12bit.csv') 
        read = csv.reader(datain, delimiter=' ', quotechar='|') 
        signal = [] 
        for row in read: 
         signal.append(ast.literal_eval(row[0])) 
    
        #Downsampling to achieve desired signal length 
        downsampling = int(round(total_data_points/data_points)) 
        signalSpeed = signal[0::downsampling] 
        listlen = len(signalSpeed) 
    
        #Construction of SPI bytes, to avoid calling functions in critical loop 
        lowByte = [] 
        highByte = [] 
        for i in signalSpeed: 
         lowByte.append(int(i/setAmplitude) & 0b11111111) 
         highByte.append(((int(i/setAmplitude) >> 8) & 0xff) | 0b0 << 7 | 0b0 << 6 | 0b1 << 5 | 0b1 << 4) 
    
        print "Starting Simulant with signal length %s ms, delay %s ms and amplitude %s mV." % (signalLength, delay, amplitude) 
        print "Press ctrl+c to stop." 
        sleep (1) 
    
        try: 
         while(True): #Main loop 
          for i in range(listlen): 
           spi.xfer2([highByte[i],lowByte[i]]) #Critical loop, no delay! 
          sleep (signalDelay) 
        except (KeyboardInterrupt, Exception) as e: 
         print e 
         print "Closing SPI channel" 
         lowByte = 0 & 0b11111111 
         highByte = ((0 >> 8) & 0xff) | 0b0 << 7 | 0b0 << 6 | 0b1 << 5 | 0b1 << 4 
         spi.xfer2([highByte, lowByte]) 
         GPIO.cleanup() 
         spi.close() 
    
    if __name__ == '__main__': 
        main() 
    

    结果正是我想要的。以下是信号长度为5 ms的示波器示例; 200赫兹。谢谢你的帮助,伙计们!

    Oscilloscope reading